Publications

My complete publication list is available on my Google Scholar profile. Select publications are detailed below:

The gremlin in the works: why T cell receptor researchers need to pay more attention to germline reference sequences

Published in ImmunoInformatics, 2025

TCR research isn't properly coping with TCR germline polymorphism

Published in Clinical and Experimental Immunology, 2025

Differential radiation-induced lymphopenia from photon vs proton based radiotherapy in GI cancer patients.

Published in Nucleic Acids Research, 2022

Stitchr, a unique tool for automatically generating full coding TCR sequences.

Published in Bioinformatics, 2020

Decombinator version 4.

Published in Scientific Reports, 2019

Developing murine xenografts for immunopeptidomics.

Published in Frontiers in Immunology, 2017

The Chain lab TCRseq pipeline.

Published in Frontiers in Immunology, 2016

TCRseq of chronically infected HIV patients.

Published in Genomics, 2016

DNA sequencing technology review.

Published in Scientific Reports, 2015

Inter-molecular stochasticity in PCR.

Published in Bioinformatics, 2013

Decombinator, an open-source tool for rapid TCRseq annotation.

Published in Journal of General Virology, 2009

My first first author publication: EBV, EMSAs, and EGR1.